BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D08SP1|AL425118
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1799 1865 0.0
>3x_Contig1799
Length = 39855
Score = 1865 bits (935), Expect = 0.0
Identities = 964/977 (98%), Gaps = 2/977 (0%)
Strand = Plus / Minus
Query: 1 aaacgataccagtttcttgaaagtcatgattcgtttcaccgccgttagtgagatagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 aaacgataccagtttcttgaaagtcatgattcgtttcaccgccgttagtgagatagaaat 1383
Query: 61 ttcagctamtggggcccgaagtgattcgcgtas-ttaggcgtgtgtttcgttcttttaca 119
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1382 ttcagctaatggggcccgaagtgattcgcgtagcttaggcgtgtgtttcgttcttttaca 1323
Query: 120 gtatggttttgttaaatgcaataattaamagattcaattaatctttaaatgttaactttt 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1322 gtatggttttgttaaatgcaataattaaaagattcaattaatctttaaatgttaactttt 1263
Query: 180 gcaatgtgacatagagtcggagacaactactaggaagaaaaacagattacgtgctacgca 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 gcaatgtgaca-agagtcggagacaactactaggaagaaaaacagattacgtgctacgca 1204
Query: 240 tgcgacaacagatcaggtattctacgattctacaactattggtgctataaatactactac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 tgcgacaacagatcaggtattctacgattctacaactattggtgctataaatactactac 1144
Query: 300 gagaaattatattaattggaacacactcttcagatatctataccttgtttcttcctttaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 gagaaattatattaattggaacacactcttcagatatctataccttgtttcttcctttaa 1084
Query: 360 aaatcagaagtctaacgtctgaaaaaaggattttratcatcataagaagcgcgttactaa 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1083 aaatcagaagtctaacgtctgaaaaaaggattttaatcatcataagaagcgcgttactaa 1024
Query: 420 gctttcaaataaatatccataaaacactcttattgaaggccatttcttctgawatgggcc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1023 gctttcaaataaatatccataaaacactcttattgaaggccatttcttctgaaatgggcc 964
Query: 480 ttgtaatatgtatcttgaaaacaaacaatttcctatggaaaggtactgcatcatcacgat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 ttgtaatatgtatcttgaaaacaaacaatttcctatggaaaggtactgcatcatcacgat 904
Query: 540 atttaagcaatccctacaatactccacagctctatatttctatagcacagcagaaaataa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 atttaagcaatccctacaatactccacagctctatatttctatagcacagcagaaaataa 844
Query: 600 ctaacgcataaracctagccgttgcattgaacccccaagacacttgtttccctaacactt 659
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ctaacgcataaaacctagccgttgcattgaacccccaagacacttgtttccctaacactt 784
Query: 660 ttaactctgcaaattgtgagtaaaaaagaatagtgtatgttcaaacaaacttcatttttt 719
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 taaactctgcaaattgtgagtaaaaaagaatagtgtatgttcaaacaaacttcatttttt 724
Query: 720 tcattatttttttyattttttgattactcgagacggtgatgagtttgaaattaattgtca 779
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tcattatttttttcattttttgattactcgagacggtgatgagtttgaaattaattgtca 664
Query: 780 agttggtgaaaaaattctggcccttagaaacatcgtagataccagtgccattgcgcttgc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agttggtgaaaaaattctggcccttagaaacatcgtagataccagtgccattgcgcttgc 604
Query: 840 tgtgatcagtggtgcatatcgagaaaagacatcctaagtcacaacggcacatatgcaatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgtgatcagtggtgcatatcgagaaaagacatcctaagtcacaacggcacatatgcaatt 544
Query: 900 ctwgtagctgagtaaatgtaggatttgcgtgcctaagacatgatgtctaatatwtgcaag 959
|| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 543 ctagtagctgagtaaatgtaggatttgcgtgcctaagacatgatgtcttatatttgcaag 484
Query: 960 gtcttcggatcgtattt 976
|||||||||||||||||
Sbjct: 483 gtcttcggatcgtattt 467
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7089
Number of Sequences: 1807
Number of extensions: 7089
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)